MICROBIAL GENOMICS LABORATORY

 

Publications (including manuscript in prep)

 

 

1. Junhyun Jeon, Sook-Young Park, Myoung-Hwan Chi, Jaehyuk Choi, Jongsun Park, Hee-Sool Rho, Soonok Kim, Jaeduk Goh, Sungyong Yoo, Jinhee Choi, Ju-Young Park, Mihwa Yi, Seonyoung Yang, Min-Jung Kwon, Seong-Sook Han, Byeong Ryun Kim, Chang Hyun Khang, Bongsoo Park, Se-Eun Lim, Kyongyong Jung, Sunghyung Kong, Maruthachalam Karunakaran, Hong-Sik Oh, Hyojeong Kim, Seryun Kim, Jaejin Park,Soyoung Kang, Woo-Bong Choi, Seogchan Kang and Yong-Hwan Lee. 2007. Genome-wide Functional Analysis of Pathogenicity Genes in the Rice Blast Fungus. Nature Genetics 39. 561-565

(Featured article in News and Views of Nature Biotechnology under the title of ‘Fungal genomics goes industrial’)

 

 2. Jaehyuk Choi, Jongsun Park, Junhyun Jeon, Myoung-Hwan Chi, Jaeduk Goh, Sung-Yong Yoo, Jaejin Park, Kyongyong Jung, Hyojeong Kim, Sook-Young Park, Hee-Sool Rho, Soonok Kim, Byeong Ryun Kim, Seong-Sook Han, Seogchan Kang and Yong-Hwan Lee. 2007. Genome-wide analysis of T-DNA integration into the chromosomes of Magnaporthe oryzae. Molecular Microbiology 66:371-382

 

3. Junhyun Jeon, Jaeduk Goh, Sungyong Yoo, Myoung-Hwan Chi, Jaehyuk Choi, Hee-Sool Rho, Jongsun Park, Seong-Sook Han, Byeong Ryun Kim, Sook-Young Park, Soonok Kim and Yong-Hwan Lee. 2008. A putative MAP kinaes kinase kinase, MCK1 is required for cell wall integrity and pathogenicity of the rice blast fungus, Magnaporthe oryzae. Molecular Plant-Microbe Interactions 21:525-534

 

4. Junhyun Jeon, Jaehyun Choi, Jongsun Park, and Yong-Hwan Lee. 2008. Functional genomics in the rice blast fungus to unravel the fungal pathogenicity (Review). Journal of Zhejiang University Science B 9(10): 747-752

 

5. Hee-Sool Rho, Junhyun Jeon, and Yong-Hwan Lee. 2009. Phospholipase C-mediated signaling is required for fungal development and pathogenicity in Magnaporthe oryzae. Molecular Plant Pathology 10(3):337 - 346

 

6. Jaeduk Goh, Kyoung Su Kim, Jaejin Park, Junhyun Jeon, Sook-Young Park, Yong-Hwan Lee. 2011. The cell cycle gene MoCDC15 regulates hyphal growth, asexual development and plant infection in the rice blast pathogen Magnaporthe oryzae. Fungal Genetics and Biology. 48(8):784-792

 

7. Jaeduk Goh, Junhyun Jeon, Kyoung Su Kim, Jongsun Park, Sook-Young Park and Yong-Hwan Lee. 2011. The Pex7-mediated peroxisomal import system is required for fungal development and pathogenicity in Magnaporthe oryzae. PLoS ONE 6(12): e28220. doi:10.1371/journal.pone.0028220

 

8. Karunakaran Maruthachalam, Junhyun Jeon, Yong-Hwan Lee and Krishna V. Subbarao. 2011. Identification of Fungal Pathogenicity Genes by Agrobacterium tumefaciens-Mediated Transformation (Book chapter). Biotechnology of Fungal Genes. pp1-19

 

9. Sook-Young Park, Jaeyoung Choi, Se-Eun Lim, Gir-Won Lee, Jongsun Park, Yangsun Kim, Sunghyung Kong, Se Ryun Kim, Hee-Sool Rho, Junhyun Jeon, Myung-Hwan Chi, Soonok Kim, Chang Hyun Khang, Seogchan Kang, and Yong-Hwan Lee. 2013. Global expression of transcription factor genes provides new insights into pathogenicity and stress responses in the rice blast fungus. PLoS Pathogens 9(6): e1003350

 

10. Junhyun Jeon, Jaeyoung Choi, Gir-won Lee, Ralph A. Dean, Yong-Hwan Lee. 2013. Experimental evolution reveals genome-wide spectrum and dynamics of mutations conferring phenotypic changes in the rice blast fungus. PLoS ONE 8(5): e65416

 

11. Hyunjung Chung, Jaehyuk Choi, Sook-Yong Park, Junhyun Jeon and Yong-Hwan Lee. 2013. Two Conidiation-related Zn(II)2Cys6 Transcription Factor Genes in the Rice Blast Fungus. Fungal Genetics and Biology. 61:133-141

 

12. Junhyun Jeon, Seomun Kwon, and Yong-Hwan Lee. 2014. Histone acetylation in fungal pathogens of plants. The Plant Pathology Journal. 30(1): 1-9

 

13. Junhyun Jeon*, Heekyoung Rho*, Seongbum Kim, Kyong-Su Kim and Yong-Hwan Lee. 2014. Role of MoAND1-mediated nuclear positioning in morphogenesis and pathogenicity in the rice blast fungus, Magnaporthe oryzae. Fungal Genetics and Biology. 69: 43-51

 

14. Md Abu Sadat*, Junhyun Jeon*, Albely Afifa Mir, Jaeyoung Choi, Jaehyuk Choi, and Yong-Hwan Lee. 2014. Regulation of cellular diacylglycerol through lipid phosphate phosphatases is required for pathogenesis of the rice blast fungus, Magnaporthe oryzae. PLoS ONE. 9(6): e100726

 

15. Md. Abu Sadat*, Junhyun Jeon*, Albely Afifa Mir, Seongbeom Kim, Jaeyoung Choi, and Yong-Hwan Lee. 2014. Analysis of in planta expressed orphan genes in the rice blast fungus, Magnaporthe oryzae. The Plant Pathology Journal. 30(4):367-374

 

16. Junhyun Jeon and Yong-Hwan Lee. 2014. The rise of epigenetics in microbial eukaryotes. Fungal Genomics and Biology. 4(1):1-2

 

17. Junhyun Jeon, Jaeyoung Choi, Gir-Won Lee, Sook-Young Park, Aram Huh, Ralph A. Dean, and Yong-Hwan Lee. 2014. Global reprogramming of DNA methylation provides new insights on asexual development and genome defense in a filamentous fungus, Magnaporthe oryzae. Scientific Reports (accepted manuscript)

 

18. Jaehyuk Choi, Junhyun Jeon, and Yong-Hwan Lee. 2015. Identification of T-DNA insertion sites: TAIL-PCR and sequence analysis (Book chapter). Genetic transformation systems in fungi (volume 2). Fungal Biology 2015, pp.217~222

 

19. Jaeyoung Choi, Jongbum Jeon, Kitae Kim, Aram Huh, Seomun Kwon, Junhyun Jeon¶ and Yong-Hwan Lee¶. 2015. dbHiMo: a web-based epigenomics platform for histone-modifying enzymes. The Journal of Biological Databases and Curation (accepted manuscript)

 

20. Seomun Kwon, Aram Huh, Sungbum Kim, Junhyun Jeon¶, and Yong-Hwan Lee¶, and. 2015. MoRTT109 is required for stress responses and pathogenicity in the rice blast fungus (manuscript in preparation)

 

21. Aram Hum, Seomun Kwon, Jaeyoung Choi, Sook-Young Park, Junhyun Jeon¶, and Yong-Hwan Lee¶. 2015. MoJMJ1-mediated histone demethylation regulates appressorium development in the rice blast fungus (manuscript in preparation)

 

22. Junhyun Jeon and Yong-Hwan Lee. Epigenetic regulation of fungal development and pathogenesis (manuscript in preparation)

 

*Co-first author

¶Co-corresponding author

 

 

Talks

 

2010

- Serial passage experiment in the rice blast fungus, Magnaporthe oryzae . PhD Symposium, North Carolina State University, USA

 

2011

- Serial passage experiment in the rice blast fungus, Magnaporthe oryzae.  Korea Filamentous Fungi Conference, Korea

 

2012

- Global reprogramming of DNA methylation in the rice blast fungus.  Concurrent session in International Society for Molecular Plant-Microbe Interactions, Kyoto, Japan

- Global reprogramming of DNA methylation in the rice blast fungus. Korea Rice Blast Workshop, Seoul, Korea

 

2013

- Dynamic reprogramming of DNA methylation during infection-related development in the rice blast fungus. Concurrent session, International Rice Blast Conference in Jeju island, Korea

- DNA methylation dynamics during development in the rice blast fungus. 2013 Korean Society of Plant Pathology Fall Meeting & International Symposium. Sunchon National University. Korea

- DNA methylation dynamics during development in the rice blast fungus. 2013 Korean Epigenetics Symposium. Hongchen, Korea

 

2014

- Plant disease: A story of a cereal killer. 2014 President Post-doctoral Fellow Workshop. Daejeon, Korea

 

- Epigenetic regulation of fungal development and pathogenesis in the rice blast fungus. International Meeting of the Federation of Korean Microbiological Societies. Ilsan (KINTEX), Korea